look for the vertically conserved regions among sequences-2 freelancer

CLOSED
Bids
4
Avg Bid (USD)
$363
Project Budget (USD)
$30 - $250

Project Description:
I have the code and need some modification using new technique.

## Deliverables

vWorker.com requirements notice: As originally posted, this project does not have complete details. Should a dispute arise and this project go into arbitration "as is", the contract's vagueness might cause it to be interpreted against you, even though you were acting in good-faith. So for your protection, if you are interested in this project, please work-out and document the requirements onsite.

Additional Project Description:
01/08/2013 at 11:02 EST
this project is about bioinformatics.. multiple sequence alignment.. need a way to find the conserve block of multiple sequence by utilize the pairwise alignment of them.

the step as as follows:
input is N sequence
make n(n-1)/n pairwise alignment 2 pair every time.
collect all the aligned pairs
extend them to construct a column.
from column build the all possible block or conserved blocks, or region.
use optimization method to find the best solution.





01/09/2013 at 2:49 EST
after doing sequential part also do the same project but in parallel way using MPI, openMP or Cuda GPU.

Skills required:
C++ Programming, Linux
About the employer:
Verified
Public Clarification Board
Bids are hidden by the project creator. Log in as the employer to view bids or to bid on this project.
You will not be able to bid on this project if you are not qualified in one of the job categories. To see your qualifications click here.


Hire satwikred
$ 400
in 7 days
$ 500
in 5 days
Hire RxD
$ 250
in 4 days
$ 300
in 4 days