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Parallel Computers and Algorithm

In the case of entire FASTQ files, this procedure should

to be made for each recording of the file. So e.g. for a file of 100 records,

the result should be 100 percent, one for each

sign up.

1. Write a program in C that sequentially calculates the GC

content of entire FASTQ files.

2. Write a program in C using an MPI library to implement

while calculating the GC content of entire FASTQ files.

3. Write a program in C using OpenMP to implement it

while calculating the GC content of entire FASTQ files.

4. Compare the times for the three different implementations and compare

calculate accelerations for different sizes of FASTQ files

(n = 100 / 10,000 / 100,000) located on github.

Skills: C Programming, Software Architecture, Algorithm, Parallels Desktop

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