In Progress

Optimal alignment of two sequences 2

Write a program that calculates the similarity of two nucleotide sequences and their best global alignment for the following cases: a) in a model with an arbitrary gap penalty function (this function should be set in the code; should also work for non-linear functions!), and b) in a model without a gap penalty function, but using an algorithm of linear memory complexity. Data should be read from a file. Data includes: 2 sequences and similarity matrix between nucleotides. The output of the program should contain the optimal alignment and its similarity

Skills: Java

See more: sequence alignment dynamic programming, types of sequence alignment, global alignment example, sequence alignment algorithm, types of sequence alignment in bioinformatics ppt, needleman wunsch algorithm pdf, sequence alignment pdf, local alignment, writer write work, write work spanish, write work accounting, example write work reviews, mod write work, professional write work daily assignments, write program perform output matrix, write work part time fulltime, write work solicitation, write work project report restaurant, write work report cooking, write report minitab output

About the Employer:
( 0 reviews ) Gaza, Palestinian Territory

Project ID: #18308119

Awarded to:


Hello I have vast knowledge on the topic which can help me get the work done perfectly and on time. i am looking forward to working with you. Regards, Evans

$100 USD in 3 days
(2 Reviews)

8 freelancers are bidding on average $135 for this job


Hello Sir/ Ma’am We are a group of Software Engineers having 10+ years of experience. Expert in JAVA, C, C++ , C# , Python, ANDROID, MATLAB . Done 550+ projects here on FREELANCER.COM. Please check our profile for re More

$155 USD in 3 days
(276 Reviews)

Hello Sir, We are perfect in desktop and web app development using java,oops,javafx,swing and awt AND J2EE, Servlet,JSP and all advanced framework like Struts, Spring MVC, Spring boot, and Spring Security, Rest web- More

$140 USD in 2 days
(19 Reviews)

hi there, i will be happy to help you, i'm available to start working now, contact me to discuss more

$100 USD in 2 days
(17 Reviews)

I have More than Five years (5+ years) of experience in Professional Software Development. Seeking for a challenging position as a Java Developer with the strong working experience in programming, designing of Spring More

$250 USD in 3 days
(5 Reviews)

Hey! I hope you are fine, I can do this work with great efficiency as I've a lot of experience in this field. I would like you to give this opportunity to me I assure you I'll not disappoint you. Thanks in advance dear More

$83 USD in 3 days
(3 Reviews)

Dear client. I've read your project description carefully and very interested. Let's discuss over chat and get started. Waiting for your reply. Best regards.

$150 USD in 1 day
(5 Reviews)

Hi! I am a Java expert and have 7 years of experience with Java. I have read your post carefully and have interesting in your project................. I know how to complete your project, and can get this developed More

$100 USD in 3 days
(1 Review)